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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015796935.1_cds_XP_016452376.1_4604
CDS Infomation

[gene=LOC107776932] [db_xref=GeneID:107776932] [protein=structural maintenance of chromosomes protein 5-like] [protein_id=XP_016452376.1] [location=join(47112..47149,47480..47657,47750..47903,49052..49125,51446..51595,51731..51835,51998..52143,52403..52514,52606..52761,52990..53111,53193..53337,53447..53512,54177..54302,54384..54482,54912..55077,55157..55302,55509..55529)] [gbkey=CDS]
Sequence

ATGTCGGAACGTCGCGCTAAACGCCCCAAAATCACCAGGGGAGAAGATGATTATATGCCA
GGAAACATAACTGAGATTGAGCTTCATAACTTCATGACGTTCAGCAAGTTGACATGCAAA
CCTGGCTCCCGATTAAATCTTGTAATTGGACCAAATGGCTCTGGAAAGAGTTCTTTAGTC
TGTGCGATAGCACTTGGTCTTGGTGGTGAGCCTCAGCTTTTGGGGAGGGCTTCTAGTATT
GGAGCATTTGTAAAACGCGGGGAGGAGTCGGGGTACATCAAGATTTCCTTGAGAGGGGAA
ACCAAGGAGGAACATTTAACTATCACGCGGAAAATAGATACACGGAACAAATCTGAGTGG
ATTTTTAATGGAAAAGCTGTGCCAAAGAAGAACATAACTGATATAACTCAAAGGTTCAAT
ATCCAAGTTAACAATTTGACTCAATTTCTACCTCAAGACAGGGTTTGTGAATTTGCAAAG
TTAACTCCTGTTCAACTCCTTGAAGAGACTGAAAAAGCTGTGGGTGATCCTCGGCTACCA
GTCCAGCATAGAGATCTTATTAGCAAGAGTGAGGAGCTGAAGAAGTCTGAACGAACTGTG
AAGAGCGGGAGAGAGACACTGGATCAGTTGAGGGAAGTCAATTCTCAACTTGAAAGAGAT
GTCGAGCGTCTCCGTCAAAGAGAGCACCTCCTAGCACAGGCTGAAACCATGAAAAAGAAA
TTGCCATGGCTGAAGTACGATGCTAAGAAGCCTGAGTTTCTGGAAGCCAAAAGGCAAGAA
CAAGATGCCAAAATGAAGCTGGATGAAGCTGCTGAGAGTTTGAATGAACTCATGGAACCT
ATAGAGGAAAAGAAGCAAGAGAAAGCAGAACGAGATGCTAAATGCAAAAAAATGAATGGC
CTGTTGGGTGACAATGCCAACAAGCGTATGAAACTTCTGGATCAGGACAATCGTTTGGAT
GTTCAAGTGCGTGGAAAGTATAATGAAATGGATGACTTCAAGAAGCAAGAGGAATCTCGT
CAACGTAGAATTTCGAAAGCCCAAGAAGATCTTAGAACTGCCGAATTGGAGCTTGCAAAT
CTTCCTCCTTATGAACCTCCTAGAGATAAAATTGATGGCTTGGGTTCTAAAATTTTGGAG
CTGCAAGATGCTGCAAGAGAACTAAGGTCTCAGAAATCAGAAATGGAGAGATCCCTTGAT
CGGAATAGGACAGCATTCAGGCAGTGCTCTGATAAATTGAAGGAGATGGAGAATGCAAAC
AACAAAAGATTACGTGCTTTACAGAGTAGTGGTGTTGAAAAGATATTTGAAGCTTACAAT
TGGGTTCAGGAGCATCAACATCAATTTAATAAATCTGTATATGGTCCAGTTCTTCTTGAG
GTCAATGTTTCCAATCGGATTCATGCAGATTACCTAGAGGATCACGTACCATTCTATGCC
TGGAAGGCCTTTATAACACAAGATGCAACTGACCGTGACTTCTTAGTTAGAAATATGCGA
TCATTTAATCTTCCTGTTTTAAATGTAGTGGATGAACGCCAGAGCCGTGTTCCCTTTAAA
ATTACTGAGGAGATGCGTATGCTAGGCATCCATTCAAGGCTTGACCAAGTCTTTGACGCT
CCAGATGCAGTCAAGGAAGTTCTAATCGACCAATTTGGGCTGGATTCTTCTTACATAGGC
TCACGTGAAACTGATAAGAGAGCTGATGAGGCGTTGCAATTGGGCATCTTTGATTTATGG
ACCCCTGAAAATCATTACAGATGGAAAAAATCCAGATATGGTGGTCATGTTTCTGGCACT
GTTGAATCAGTGGAACACTCTCGCCTTTTGCTATGCAATGTGGATGCGGGGGAAGTTGAG
AGGCTCAAGTCCCAGAAACTTGAGTTGGAAGAAGCCGTTTCTGCATTTGAAGATAATCTC
AGGGCAGTTAAGAGTGAATTGAAAAACATAGAGGATCAAGGTGCCAAACTCGAAAAGCAA
CGGCACGGGAGAAAATATTATTAA

Peptide Sequence

PEP ID

XP_016452376.1
PEP Infomation

PREDICTED: structural maintenance of chromosomes protein 5-like [Nicotiana tabacum]
Sequence

MSERRAKRPKITRGEDDYMPGNITEIELHNFMTFSKLTCKPGSRLNLVIGPNGSGKSSLV
CAIALGLGGEPQLLGRASSIGAFVKRGEESGYIKISLRGETKEEHLTITRKIDTRNKSEW
IFNGKAVPKKNITDITQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPRLP
VQHRDLISKSEELKKSERTVKSGRETLDQLREVNSQLERDVERLRQREHLLAQAETMKKK
LPWLKYDAKKPEFLEAKRQEQDAKMKLDEAAESLNELMEPIEEKKQEKAERDAKCKKMNG
LLGDNANKRMKLLDQDNRLDVQVRGKYNEMDDFKKQEESRQRRISKAQEDLRTAELELAN
LPPYEPPRDKIDGLGSKILELQDAARELRSQKSEMERSLDRNRTAFRQCSDKLKEMENAN
NKRLRALQSSGVEKIFEAYNWVQEHQHQFNKSVYGPVLLEVNVSNRIHADYLEDHVPFYA
WKAFITQDATDRDFLVRNMRSFNLPVLNVVDERQSRVPFKITEEMRMLGIHSRLDQVFDA
PDAVKEVLIDQFGLDSSYIGSRETDKRADEALQLGIFDLWTPENHYRWKKSRYGGHVSGT
VESVEHSRLLLCNVDAGEVERLKSQKLELEEAVSAFEDNLRAVKSELKNIEDQGAKLEKQ
RHGRKYY

Transcript Sequence

Gene sequence data has not been registered.